Resources

Knowledge-primed neural networks

Knowledge-primed neural networks

Interpretable deep learning

Software

Single-cell atlas of LCH

Single-cell atlas of LCH

Single-cell atlas of Langerhans cell histiocytosis

Dataset

DNA methylation heterogeneity in glioblastoma

DNA methylation heterogeneity in glioblastoma

Heterogeneous DNA methylation landscape of glioblastoma disease progression

Dataset

CROP-seq

CROP-seq

CRISPR screening with single-cell RNA-seq readout

Protocol

LOLA

LOLA

Region-seq enrichment analysis

Software

µWGBS & scWGBS

µWGBS & scWGBS

Low-input and single-cell DNA methylation profiling

Protocol

Immune regulation in structural cells

Immune regulation in structural cells

Multi-omics atlas of the epigenetic and transcriptional networks that regulate structural cells in the mouse

Dataset

RnBeads

RnBeads

DNA methylation analysis

Software

VCF.filter

VCF.filter

Interactive filtering of genetic variants

Software

DNA methylation in human hematopoietic development

DNA methylation in human hematopoietic development

DNA methylation dynamics of human hematopoietic stem cell differentiation

Dataset

RefFreeDMA

RefFreeDMA

Reference-free analysis of DNA methylation

Software

BiQ Analyzer

BiQ Analyzer

Bisulfite sequencing analysis

Software

scifi-RNA-seq

scifi-RNA-seq

Ultra-high throughput single-cell RNA sequencing

Protocol

Chromatin profiles of CLL

Chromatin profiles of CLL

Chromatin accessibility maps of chronic lymphocytic leukemia

Dataset

DNA methylation signatures in Ewing sarcoma

DNA methylation signatures in Ewing sarcoma

A comprehensive study of epigenetic heterogeneity in Ewing sarcoma

Dataset

DNA methylation assays

DNA methylation assays

Benchmarking of DNA methylation assays for biomarkers and clinical application

Dataset

ChIPmentation

ChIPmentation

Low-input and high-throughput chromatin mapping

Protocol